About stochastic differential equations
- To: mathgroup at smc.vnet.net
- Subject: [mg19572] About stochastic differential equations
- From: Dimitris Kugiumtzis <dimitris at mpipks-dresden.mpg.de>
- Date: Wed, 1 Sep 1999 23:07:05 -0400
- Sender: owner-wri-mathgroup at wolfram.com
Some time ago I posted a question for how to solve (using NDSolve) differential equations with noise. I got some response and I solved the problem (I believe) thanks to David Park who sent me a notebook. Since some others showed interest in this problem I attach the notebook (with his permission). Blimbaum Jerry pointed an easier way to solve the problem (which I did not test because I had already implemented the notebook of David): soln = NDSolve[{x'[t] == Random[] + Sin[t], x[0] == 1}, x[t], {t, 0, 5}] // First Plot[x[t] /. soln, {t, 0, 5}, PlotRange -> All]; Thanks also to Jens-Peer Kuska and Robert L. Thrash for their comments. I should say that I was pleased to get all this response. Dimitris -- Dimitris Kugiumtzis Max-Planck-Institute for Physics of Complex Systems Noethnitzer Str. 38, 01187 Dresden, Germany office tel: +49-351-8712211, fax: +49-351-8711199 home tel : +49-351-4702378, mob: +49-171-1646864 official e-mail: dimitris at mpipks-dresden.mpg.de lifetime e-mail: dimitris.kugiumtzis at iname.com http://www.mpipks-dresden.mpg.de/~dimitris (*********************************************************************** Mathematica-Compatible Notebook This notebook can be used on any computer system with Mathematica 4.0, MathReader 4.0, or any compatible application. The data for the notebook starts with the line containing stars above. 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I \ think the options are Automatic (which is adaptive, I think), RungeKutta, \ Adams and Gear. RungeKutta seems to work OK. WRI doesn't tell us too much \ about this because maybe things will change in future releases.\ \>", "Text"], Cell[CellGroupData[{ Cell[BoxData[ \(Options[NDSolve]\)], "Input"], Cell[BoxData[ RowBox[{"{", RowBox[{\(AccuracyGoal \[Rule] Automatic\), ",", \(Compiled \[Rule] True\), ",", \(DifferenceOrder \[Rule] Automatic\), ",", \(InterpolationPrecision \[Rule] Automatic\), ",", \(MaxRelativeStepSize \[Rule] 1\), ",", \(MaxSteps \[Rule] Automatic\), ",", RowBox[{"MaxStepSize", "\[Rule]", InterpretationBox["\[Infinity]", DirectedInfinity[ 1]]}], ",", \(Method \[Rule] Automatic\), ",", \(PrecisionGoal \[Rule] Automatic\), ",", \(SolveDelayed \[Rule] False\), ",", \(StartingStepSize \[Rule] Automatic\), ",", \(StoppingTest \[Rule] None\), ",", \(WorkingPrecision \[Rule] 16\)}], "}"}]], "Output"] }, Open ]], Cell[CellGroupData[{ Cell["The Differential Equations", "Subsection"], Cell["\<\ These are the equations. 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Using ", Cell[BoxData[ \(Method \[Rule] Automatic\)]], " does not work." }], "Text"], Cell[CellGroupData[{ Cell[BoxData[{ \(\(data = \n\t{V \[Rule] 100.0, \n\t\tKm \[Rule] 1.0, \n\t\tKeq \[Rule] 100.0, \n\t\ta \[Rule] 1.0, \n\t\tr \[Rule] 0.001, \n\t\tp \[Rule] 1, \n\t\tx10 \[Rule] 1.2, \n\t\tx20 \[Rule] 0.8};\)\), "\n", \(\(seqns = deqns /. data;\)\), "\n", \(dsol = NDSolve[seqns, {x1, x2}, {t, 0, 100}, AccuracyGoal \[Rule] 2, MaxSteps \[Rule] 8000, Method \[Rule] Automatic]\)}], "Input", CellTags->"DifferentiationSimulation"], Cell[BoxData[ \(NDSolve::"ndcf" \(\(:\)\(\ \)\) "Repeated convergence test failure at \!\(t\) == \ \!\(62.477993540396476`\); unable to continue."\)], "Message"], Cell[BoxData[ RowBox[{"{", RowBox[{"{", RowBox[{ RowBox[{"x1", "\[Rule]", TagBox[\(InterpolatingFunction[{{0.`, 62.477993540396476`}}, "<>"]\), False, Editable->False]}], ",", RowBox[{"x2", "\[Rule]", TagBox[\(InterpolatingFunction[{{0.`, 62.477993540396476`}}, "<>"]\), False, Editable->False]}]}], "}"}], "}"}]], "Output"] }, Open ]], Cell[TextData[{ "But using ", Cell[BoxData[ \(Method \[Rule] RungeKutta\)]], " works. 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I got some response and I solved the problem (I believe) thanks to David Park who sent me a notebook. Since some others showed interest in this problem I attach the notebook (with his permission). Blimbaum Jerry pointed an easier way to solve the problem (which I did not test because I had already implemented the notebook of David): soln = NDSolve[{x'[t] == Random[] + Sin[t], x[0] == 1}, x[t], {t, 0, 5}] // First Plot[x[t] /. soln, {t, 0, 5}, PlotRange -> All]; Thanks also to Jens-Peer Kuska and Robert L. Thrash for their comments. I should say that I was pleased to get all this response. Dimitris -- Dimitris Kugiumtzis Max-Planck-Institute for Physics of Complex Systems Noethnitzer Str. 38, 01187 Dresden, Germany office tel: +49-351-8712211, fax: +49-351-8711199 home tel : +49-351-4702378, mob: +49-171-1646864 official e-mail: dimitris at mpipks-dresden.mpg.de lifetime e-mail: dimitris.kugiumtzis at iname.com http://www.mpipks-dresden.mpg.de/~dimitris --------------AEFC719D6E6960B45DD6EE67 <HTML> Some time ago I posted a question for how to solve (using <BR>NDSolve) differential equations with noise. <P>I got some response and I solved the problem (I believe) thanks to <BR>David Park who sent me a notebook. Since some others showed <BR>interest in this problem I attach the notebook (with his permission). <BR>Blimbaum Jerry pointed an easier way to solve the problem (which <BR>I did not test because I had already implemented the notebook <BR>of David): <BR>soln = NDSolve[{x'[t] == Random[] + Sin[t], x[0] == 1}, x[t], {t, 0, <BR>5}] // First <BR>Plot[x[t] /. soln, {t, 0, 5}, PlotRange -> All]; <P>Thanks also to Jens-Peer Kuska and Robert L. Thrash for their <BR>comments. <P>I should say that I was pleased to get all this response. <P>Dimitris <BR> <PRE>-- Dimitris Kugiumtzis Max-Planck-Institute for Physics of Complex Systems Noethnitzer Str. 38, 01187 Dresden, Germany office tel: +49-351-8712211, fax: +49-351-8711199 home tel : +49-351-4702378, mob: +49-171-1646864 official e-mail: dimitris at mpipks-dresden.mpg.de lifetime e-mail: dimitris.kugiumtzis at iname.com <A HREF="http://www.mpipks-dresden.mpg.de/~dimitris">http://www.mpipks-dresden.mpg.de/~dimitris</A></PRE> </HTML> --------------AEFC719D6E6960B45DD6EE67-- --------------8AAB8EAB10A822084B24C553 (*********************************************************************** Mathematica-Compatible Notebook This notebook can be used on any computer system with Mathematica 4.0, MathReader 4.0, or any compatible application. The data for the notebook starts with the line containing stars above. 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For more information on notebooks and Mathematica-compatible applications, contact Wolfram Research: web: http://www.wolfram.com email: info at wolfram.com phone: +1-217-398-0700 (U.S.) Notebook reader applications are available free of charge from Wolfram Research. ***********************************************************************) (*CacheID: 232*) (*NotebookFileLineBreakTest NotebookFileLineBreakTest*) (*NotebookOptionsPosition[ 16862, 495]*) (*NotebookOutlinePosition[ 18742, 552]*) (* CellTagsIndexPosition[ 18466, 541]*) (*WindowFrame->Normal*) Notebook[{ Cell[CellGroupData[{ Cell["Stochastic Differential Equations", "Title"], Cell["\<\ David Park djmp at earthlink.net http://home.earthlink.net/~djmp/\ \>", "Subtitle"], Cell[BoxData[ \(<< Graphics`Colors`\)], "Input"], Cell[TextData[{ "This is an example of simulating two differential equations with random \ noise present. It is from ", StyleBox["Flux Induced Biochemical Differentiation, J. theor. Biol (1975) \ 54, 363-379. 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Using ", Cell[BoxData[ \(Method \[Rule] Automatic\)]], " does not work." }], "Text"], Cell[CellGroupData[{ Cell[BoxData[{ \(\(data = \n\t{V \[Rule] 100.0, \n\t\tKm \[Rule] 1.0, \n\t\tKeq \[Rule] 100.0, \n\t\ta \[Rule] 1.0, \n\t\tr \[Rule] 0.001, \n\t\tp \[Rule] 1, \n\t\tx10 \[Rule] 1.2, \n\t\tx20 \[Rule] 0.8};\)\), "\n", \(\(seqns = deqns /. data;\)\), "\n", \(dsol = NDSolve[seqns, {x1, x2}, {t, 0, 100}, AccuracyGoal \[Rule] 2, MaxSteps \[Rule] 8000, Method \[Rule] Automatic]\)}], "Input", CellTags->"DifferentiationSimulation"], Cell[BoxData[ \(NDSolve::"ndcf" \(\(:\)\(\ \)\) "Repeated convergence test failure at \!\(t\) == \ \!\(62.477993540396476`\); unable to continue."\)], "Message"], Cell[BoxData[ RowBox[{"{", RowBox[{"{", RowBox[{ RowBox[{"x1", "\[Rule]", TagBox[\(InterpolatingFunction[{{0.`, 62.477993540396476`}}, "<>"]\), False, Editable->False]}], ",", RowBox[{"x2", "\[Rule]", TagBox[\(InterpolatingFunction[{{0.`, 62.477993540396476`}}, "<>"]\), False, Editable->False]}]}], "}"}], "}"}]], "Output"] }, Open ]], Cell[TextData[{ "But using ", Cell[BoxData[ \(Method \[Rule] RungeKutta\)]], " works. 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