coloring of proteins when using Import[] from PDB
- To: mathgroup at smc.vnet.net
- Subject: [mg96556] coloring of proteins when using Import[] from PDB
- From: congruentialuminaire at yahoo.com
- Date: Mon, 16 Feb 2009 06:58:14 -0500 (EST)
Hello MathGroup: If anyone can tell me how the Import[] command decides how to color proteins I am interested in this. An example is: Import["http://www.genome.ad.jp/dbget-bin/www_bget?pdb+1THJ+withATOM";, "PDB"] This is a trimer called "gamma"-Carbonic Anhydrase. In the book I am working from (i.e. BiochemistryV6 by Stryer p.259), the coloring reflects the trimeric structure. In the rendering from Import[], all three alpha-helices have the same color for example. TIA. Roger Williams Franklin Laboratory